Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW035_06775 | Not Available | Positive | 1627806 - 1628015 | 8134.23 |
| hypothetical protein | DW035_06780 | Not Available | Positive | 1628038 - 1628409 | 14059.8 |
| hypothetical protein | DW035_06785 | Not Available | Negative | 1628622 - 1629008 | 14356.3 |
| hypothetical protein | DW035_06790 | Not Available | Negative | 1629035 - 1629526 | 18985.7 |
| hypothetical protein | DW035_06795 | Not Available | Negative | 1629648 - 1630403 | 29677.4 |
| site-specific integrase | DW035_06805 | Not Available | Negative | 1630886 - 1631473 | 22702.0 |
| dna repair protein | DW035_06810 | Not Available | Negative | 1631629 - 1632075 | 16835.4 |
| hypothetical protein | DW035_06815 | Not Available | Negative | 1632086 - 1632358 | 10827.8 |
| duf3871 family protein | DW035_06820 | Not Available | Negative | 1632446 - 1633468 | 38694.2 |
| hypothetical protein | DW035_06825 | Not Available | Positive | 1633627 - 1633809 | 7146.89 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

