Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl transferase | DW035_06705 | Not Available | Negative | 1612678 - 1614354 | 64213.2 |
| v-type atp synthase subunit k | DW035_06710 | Not Available | Negative | 1614607 - 1615068 | 15440.2 |
| v-type atp synthase subunit i | DW035_06715 | Not Available | Negative | 1615104 - 1616912 | 66660.2 |
| v-type atp synthase subunit d | DW035_06720 | Not Available | Negative | 1616909 - 1617514 | 23636.8 |
| v-type atp synthase subunit b | DW035_06725 | Not Available | Negative | 1617532 - 1618851 | 48058.5 |
| v-type atp synthase subunit a | DW035_06730 | Not Available | Negative | 1618876 - 1620633 | 65705.2 |
| duf2764 domain-containing protein | DW035_06735 | Not Available | Negative | 1620649 - 1621488 | 32911.4 |
| hypothetical protein | DW035_06740 | Not Available | Negative | 1621498 - 1622088 | 22114.4 |
| Trna-ala | Not Available | Not Available | Positive | 1625549 - 1625625 | Not Available |
| Trna-ile | Not Available | Not Available | Positive | 1625701 - 1625777 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

