Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-ketoacyl-[acyl-carrier-protein] synthase ii | DW035_00475 | Not Available | Negative | 157251 - 158516 | 44670.8 |
| acyl carrier protein | DW035_00480 | Not Available | Negative | 158532 - 158768 | 8436.89 |
| 4-phosphoerythronate dehydrogenase pdxb | DW035_00485 | Not Available | Negative | 158927 - 159937 | 37842.3 |
| glycosyltransferase family 2 protein | DW035_00490 | Not Available | Positive | 160182 - 160898 | 27327.8 |
| hypothetical protein | DW035_00495 | Not Available | Positive | 160911 - 161651 | 28271.0 |
| glycosyltransferase | DW035_00500 | Not Available | Positive | 161661 - 162557 | 34446.4 |
| abc transporter atp-binding protein | DW035_00505 | Not Available | Negative | 162627 - 164468 | 69465.6 |
| acetyltransferase | DW035_00510 | Not Available | Positive | 164614 - 165522 | 37392.7 |
| glycosyltransferase | DW035_00515 | Not Available | Positive | 165534 - 166433 | 33957.0 |
| hypothetical protein | DW035_00520 | Not Available | Negative | 166688 - 167446 | 28570.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

