Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW035_06385 | Not Available | Negative | 1526944 - 1527702 | 28646.4 |
| hypothetical protein | DW035_06390 | Not Available | Negative | 1527705 - 1528802 | 42607.0 |
| hypothetical protein | DW035_06395 | Not Available | Negative | 1528811 - 1529458 | 24138.9 |
| duf4339 domain-containing protein | DW035_06400 | Not Available | Negative | 1529504 - 1532602 | 116258.0 |
| hypothetical protein | DW035_06405 | Not Available | Negative | 1532646 - 1533251 | 22752.8 |
| site-specific integrase | DW035_06410 | Not Available | Negative | 1533513 - 1534721 | 46706.4 |
| hypothetical protein | DW035_06415 | Not Available | Negative | 1534727 - 1535389 | 25113.7 |
| hypothetical protein | DW035_06425 | Not Available | Negative | 1535740 - 1539174 | 130090.0 |
| exonuclease sbccd subunit d | DW035_06430 | Not Available | Negative | 1539178 - 1540392 | 46215.9 |
| s9 family peptidase | DW035_06435 | Not Available | Negative | 1540398 - 1542842 | 91390.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

