Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase family 2 protein | DW035_06120 | Not Available | Positive | 1470878 - 1471867 | 38413.0 |
| glycosyltransferase family 2 protein | DW035_06125 | Not Available | Positive | 1471884 - 1472759 | 34581.2 |
| o-antigen polysaccharide polymerase wzy | DW035_06130 | Not Available | Positive | 1472772 - 1473938 | 44802.9 |
| glycosyltransferase family 1 protein | DW035_06135 | Not Available | Positive | 1473935 - 1475008 | 41273.7 |
| glycosyltransferase | DW035_06140 | Not Available | Positive | 1475010 - 1475810 | 30570.1 |
| chain-length determining protein | DW035_06145 | Not Available | Positive | 1475907 - 1477007 | 41262.2 |
| hypothetical protein | DW035_06150 | Not Available | Positive | 1477022 - 1478509 | 55878.0 |
| hypothetical protein | DW035_06155 | Not Available | Positive | 1478521 - 1478964 | 17053.4 |
| hypothetical protein | DW035_06160 | Not Available | Negative | 1479087 - 1479353 | 9765.82 |
| hypothetical protein | DW035_06165 | Not Available | Negative | 1479493 - 1481409 | 71206.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

