Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | DW035_06005 | Not Available | Negative | 1448035 - 1448907 | 33488.1 |
| mfs transporter | DW035_06010 | Not Available | Negative | 1448945 - 1450585 | 62424.4 |
| hlyd family secretion protein | DW035_06015 | Not Available | Negative | 1450590 - 1451684 | 40620.7 |
| tolc family protein | DW035_06020 | Not Available | Negative | 1451736 - 1453061 | 50758.7 |
| mobilization protein | DW035_06030 | Not Available | Negative | 1453575 - 1454552 | 38015.1 |
| mobilization protein | DW035_06035 | Not Available | Negative | 1454611 - 1454934 | 12656.0 |
| sugar o-acetyltransferase | DW035_06045 | Not Available | Positive | 1455464 - 1456021 | 20753.1 |
| hypothetical protein | DW035_06050 | Not Available | Positive | 1456298 - 1456963 | 25478.7 |
| rna polymerase sigma-70 factor | DW035_06055 | Not Available | Positive | 1456988 - 1457578 | 23095.8 |
| duf4974 domain-containing protein | DW035_06060 | Not Available | Positive | 1457644 - 1458654 | 38728.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

