Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetyltransferase | DW035_05855 | Not Available | Negative | 1414509 - 1414991 | 18614.3 |
| 1,4-dihydroxy-2-naphthoate octaprenyltransferase | DW035_05860 | Not Available | Negative | 1414993 - 1415883 | 32544.0 |
| metallophosphoesterase | DW035_05865 | Not Available | Positive | 1415975 - 1416811 | 30903.4 |
| nicotinate-nucleotide adenylyltransferase | DW035_05870 | Not Available | Negative | 1416812 - 1417405 | 23090.7 |
| hypothetical protein | DW035_05875 | Not Available | Negative | 1417384 - 1417569 | 6834.97 |
| guanylate kinase | DW035_05880 | Not Available | Negative | 1417580 - 1418146 | 21163.1 |
| yicc family protein | DW035_05885 | Not Available | Negative | 1418155 - 1419030 | 33650.4 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex dimerization subunit type 1 tsab | DW035_05890 | Not Available | Positive | 1419237 - 1419926 | 25089.4 |
| duf4290 domain-containing protein | DW035_05895 | Not Available | Positive | 1419984 - 1420586 | 23966.8 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | DW035_05900 | Not Available | Positive | 1420602 - 1421909 | 47410.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

