Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa synthetase | DW035_05805 | Not Available | Positive | 1403012 - 1404667 | 62451.5 |
| nad kinase | DW035_05810 | Not Available | Negative | 1404748 - 1405620 | 32720.4 |
| pyridoxine 5'-phosphate synthase | DW035_05815 | Not Available | Positive | 1405741 - 1406454 | 26477.6 |
| mota/tolq/exbb proton channel family protein | DW035_05820 | Not Available | Positive | 1406458 - 1407177 | 25859.0 |
| biopolymer transporter exbd | DW035_05825 | Not Available | Positive | 1407184 - 1407600 | 15726.3 |
| tonb family protein | DW035_05830 | Not Available | Positive | 1407613 - 1408449 | 29215.9 |
| dj-1/pfpi family protein | DW035_05835 | Not Available | Positive | 1408476 - 1409024 | 19269.9 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | DW035_05840 | Not Available | Positive | 1409024 - 1409692 | 24368.4 |
| atp-dependent dna helicase recg | DW035_05845 | Not Available | Positive | 1409692 - 1411791 | 80537.9 |
| glycosyl hydrolase family 35 | DW035_05850 | Not Available | Positive | 1412129 - 1414435 | 86765.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

