Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW035_05555 | Not Available | Negative | 1335899 - 1338385 | 94194.7 |
| fecr family protein | DW035_05560 | Not Available | Negative | 1338390 - 1339163 | 29508.1 |
| rna polymerase sigma-70 factor | DW035_05565 | Not Available | Negative | 1339405 - 1339959 | 21385.9 |
| hypothetical protein | DW035_05570 | Not Available | Negative | 1340161 - 1340496 | 12132.2 |
| sodium:calcium antiporter | DW035_05575 | Not Available | Negative | 1340561 - 1341526 | 33554.8 |
| hypothetical protein | DW035_05580 | Not Available | Negative | 1341539 - 1342534 | 36795.9 |
| glycoside hydrolase | DW035_05585 | Not Available | Positive | 1342716 - 1344638 | 72565.9 |
| alpha-l-arabinofuranosidase | DW035_05590 | Not Available | Positive | 1344665 - 1347175 | 93778.4 |
| beta-galactosidase | DW035_05595 | Not Available | Positive | 1347274 - 1349616 | 88573.7 |
| nad(p)-dependent oxidoreductase | DW035_05600 | Not Available | Positive | 1349809 - 1351122 | 47279.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

