Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar kinase | DW204_04960 | Not Available | Negative | 1240298 - 1241338 | 38510.8 |
| acetate kinase | DW204_04965 | Not Available | Negative | 1241492 - 1242691 | 43532.8 |
| phosphate acetyltransferase | DW204_04970 | Not Available | Negative | 1242788 - 1243798 | 35450.4 |
| hypothetical protein | DW204_04975 | Not Available | Negative | 1243809 - 1244006 | 7727.75 |
| cida/lrga family protein | DW204_04980 | Not Available | Positive | 1244035 - 1244385 | 13068.8 |
| lrgb family protein | DW204_04985 | Not Available | Positive | 1244366 - 1245061 | 24403.0 |
| duf2156 domain-containing protein | DW204_04990 | Not Available | Positive | 1245156 - 1246049 | 34363.9 |
| gnat family n-acetyltransferase | DW204_04995 | Not Available | Positive | 1246046 - 1247071 | 39247.0 |
| tigr00159 family protein | DW204_05000 | Not Available | Negative | 1247074 - 1247853 | 29107.3 |
| dihydropteroate synthase | DW204_05005 | Not Available | Negative | 1247886 - 1248734 | 31586.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

