Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor | DW204_04810 | Not Available | Positive | 1208446 - 1208949 | 19854.7 |
| hypothetical protein | DW204_04815 | Not Available | Negative | 1209056 - 1209451 | 15214.9 |
| sodium-dependent transporter | DW204_04820 | Not Available | Positive | 1209542 - 1210915 | 49419.5 |
| helix-hairpin-helix domain-containing protein | DW204_04825 | Not Available | Positive | 1210915 - 1211811 | 34822.3 |
| alkaline phosphatase | DW204_04830 | Not Available | Negative | 1211813 - 1213231 | 52174.6 |
| fimbrillin family protein | DW204_04835 | Not Available | Positive | 1213386 - 1214348 | 35506.3 |
| xanthine phosphoribosyltransferase | DW204_04840 | Not Available | Positive | 1214513 - 1215082 | 20999.9 |
| purine permease | DW204_04845 | Not Available | Positive | 1215091 - 1216425 | 46609.1 |
| duf3332 domain-containing protein | DW204_04850 | Not Available | Negative | 1216499 - 1217050 | 20062.8 |
| mfs transporter | DW204_04855 | Not Available | Positive | 1217213 - 1218790 | 57938.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

