Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deoxyguanosinetriphosphate triphosphohydrolase | DW204_04760 | Not Available | Negative | 1193147 - 1194478 | 50456.4 |
| dutp diphosphatase | DW204_04765 | Not Available | Positive | 1194617 - 1195051 | 15768.0 |
| hypothetical protein | DW204_04770 | Not Available | Positive | 1195062 - 1196846 | 69084.1 |
| duf4292 domain-containing protein | DW204_04775 | Not Available | Positive | 1196933 - 1197676 | 28022.0 |
| peptidase m23 | DW204_04780 | Not Available | Positive | 1197673 - 1198983 | 50334.6 |
| duf5110 domain-containing protein | DW204_04785 | Not Available | Positive | 1199423 - 1203238 | 142336.0 |
| m20/m25/m40 family metallo-hydrolase | DW204_04790 | Not Available | Negative | 1203345 - 1204409 | 38866.5 |
| long-chain fatty acid--coa ligase | DW204_04795 | Not Available | Positive | 1204534 - 1206348 | 69004.7 |
| pcrf domain-containing protein | DW204_04800 | Not Available | Positive | 1206444 - 1207559 | 42555.1 |
| cyth domain-containing protein | DW204_04805 | Not Available | Positive | 1207802 - 1208308 | 19706.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

