Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-2-hydroxyacid dehydrogenase | DW204_04555 | Not Available | Negative | 1151482 - 1152441 | 34757.0 |
| replication-associated recombination protein a | DW204_04560 | Not Available | Negative | 1152468 - 1153742 | 47386.2 |
| glutamine--trna ligase/yqey domain fusion protein | DW204_04565 | Not Available | Positive | 1154200 - 1155939 | 67077.2 |
| is3 family transposase | DW204_04575 | Not Available | Negative | 1156608 - 1157054 | 16762.0 |
| n-acetylglucosamine-6-phosphate deacetylase | DW204_04580 | Not Available | Negative | 1157371 - 1158540 | 42257.8 |
| n-acetylglucosamine-6-phosphate deacetylase | DW204_04585 | Not Available | Negative | 1158562 - 1159728 | 42531.5 |
| hypothetical protein | DW204_04590 | Not Available | Positive | 1159749 - 1159994 | 9569.94 |
| duf177 domain-containing protein | DW204_04595 | Not Available | Positive | 1160111 - 1160647 | 20480.2 |
| 50s ribosomal protein l32 | DW204_04600 | Not Available | Positive | 1160664 - 1160849 | 6852.33 |
| ketoacyl-acp synthase iii | DW204_04605 | Not Available | Positive | 1160957 - 1161958 | 36726.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

