Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysm peptidoglycan-binding domain-containing protein | DW204_04505 | Not Available | Positive | 1144387 - 1146186 | 68015.0 |
| port family protein | DW204_04510 | Not Available | Positive | 1146188 - 1146895 | 26779.0 |
| exodeoxyribonuclease iii | DW204_04515 | Not Available | Positive | 1146901 - 1147659 | 29541.9 |
| diacylglycerol kinase family protein | DW204_04520 | Not Available | Positive | 1147668 - 1148045 | 13439.7 |
| pap2 family protein | DW204_04525 | Not Available | Positive | 1148042 - 1148599 | 20185.4 |
| maoc family dehydratase | DW204_04530 | Not Available | Negative | 1148673 - 1149137 | 17750.6 |
| hypothetical protein | DW204_04535 | Not Available | Negative | 1149293 - 1149499 | 7811.56 |
| cation transporter | DW204_04540 | Not Available | Positive | 1149677 - 1150591 | 33121.5 |
| hypothetical protein | DW204_04545 | Not Available | Negative | 1150664 - 1150867 | 7601.3 |
| c_gcaxxg_c_c family protein | DW204_04550 | Not Available | Negative | 1151000 - 1151467 | 16990.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

