Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-cys | Not Available | Not Available | Positive | 1134660 - 1134731 | Not Available |
| Trna-cys | Not Available | Not Available | Positive | 1134757 - 1134828 | Not Available |
| glucose-1-phosphate thymidylyltransferase | DW204_04465 | Not Available | Positive | 1135023 - 1135916 | 33090.9 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | DW204_04470 | Not Available | Positive | 1135937 - 1136512 | 22261.4 |
| gnat family n-acetyltransferase | DW204_04475 | Not Available | Negative | 1136576 - 1138129 | 59994.8 |
| dicarboxylate/amino acid:cation symporter | DW204_04480 | Not Available | Positive | 1138239 - 1139414 | 41815.0 |
| hypothetical protein | DW204_04485 | Not Available | Positive | 1139448 - 1139882 | 17081.6 |
| molecular chaperone djla | DW204_04490 | Not Available | Negative | 1140060 - 1140845 | 29373.3 |
| cys-trna(pro) deacylase | DW204_04495 | Not Available | Negative | 1140872 - 1141354 | 17710.7 |
| excinuclease abc subunit uvra | DW204_04500 | Not Available | Negative | 1141354 - 1144191 | 105824.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

