Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome b6 | DW204_04405 | Not Available | Negative | 1124784 - 1126172 | 51159.7 |
| cytochrome c assembly protein | DW204_04410 | Not Available | Negative | 1126225 - 1127007 | 30021.9 |
| hypothetical protein | DW204_04415 | Not Available | Negative | 1127036 - 1127938 | 33971.6 |
| l-fucose:h+ symporter permease | DW204_04420 | Not Available | Negative | 1128062 - 1129375 | 48581.2 |
| rhamnulokinase | DW204_04425 | Not Available | Negative | 1129418 - 1130761 | 49205.1 |
| class ii aldolase/adducin family protein | DW204_04430 | Not Available | Negative | 1130758 - 1131396 | 23375.3 |
| l-fucose isomerase | DW204_04435 | Not Available | Negative | 1131469 - 1133241 | 65391.8 |
| gntr family transcriptional regulator | DW204_04440 | Not Available | Negative | 1133346 - 1134332 | 38053.3 |
| Trna-lys | Not Available | Not Available | Positive | 1134472 - 1134547 | Not Available |
| Trna-cys | Not Available | Not Available | Positive | 1134560 - 1134634 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

