Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metallophosphoesterase | DW204_04300 | Not Available | Positive | 1095765 - 1096934 | 44363.4 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | DW204_04305 | Not Available | Positive | 1096949 - 1097698 | 28369.1 |
| duf4369 domain-containing protein | DW204_04310 | Not Available | Negative | 1097743 - 1098438 | 26202.9 |
| s46 family peptidase | DW204_04315 | Not Available | Positive | 1098614 - 1100785 | 81211.9 |
| s46 family peptidase | DW204_04320 | Not Available | Positive | 1100785 - 1102947 | 81566.0 |
| exodeoxyribonuclease vii small subunit | DW204_04325 | Not Available | Negative | 1102986 - 1103195 | 8037.58 |
| exodeoxyribonuclease vii large subunit | DW204_04330 | Not Available | Negative | 1103197 - 1104501 | 49715.9 |
| serine protease | DW204_04335 | Not Available | Negative | 1104491 - 1105882 | 50918.4 |
| mate family efflux transporter | DW204_04340 | Not Available | Positive | 1106006 - 1107379 | 49693.7 |
| cytidylate kinase-like family protein | DW204_04345 | Not Available | Positive | 1107449 - 1108078 | 23587.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

