Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW204_04250 | Not Available | Negative | 1087013 - 1087528 | 19230.2 |
| hypothetical protein | DW204_04255 | Not Available | Negative | 1087598 - 1087825 | 8882.4 |
| rna polymerase sigma-70 factor | DW204_04260 | Not Available | Negative | 1087830 - 1088333 | 18949.7 |
| hypothetical protein | DW204_04265 | Not Available | Negative | 1088354 - 1088938 | 20693.7 |
| hypothetical protein | DW204_04270 | Not Available | Negative | 1089063 - 1089296 | 9519.63 |
| tetratricopeptide repeat protein | DW204_04275 | Not Available | Positive | 1089295 - 1091460 | 84681.2 |
| type ii pantothenate kinase | DW204_04280 | Not Available | Negative | 1091505 - 1092341 | 29675.3 |
| polyprenol monophosphomannose synthase | DW204_04285 | Not Available | Positive | 1092738 - 1093484 | 28602.5 |
| dihydroorotase | DW204_04290 | Not Available | Positive | 1093494 - 1094834 | 49397.1 |
| 5-methyltetrahydrofolate--homocysteine methyltransferase | DW204_04295 | Not Available | Positive | 1094845 - 1095750 | 34364.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

