Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa carboxylase biotin carboxyl carrier protein subunit | DW204_04200 | Not Available | Negative | 1072578 - 1073099 | 19186.0 |
| acetyl-coa carboxylase biotin carboxylase subunit | DW204_04205 | Not Available | Negative | 1073125 - 1074636 | 57264.8 |
| hypothetical protein | DW204_04210 | Not Available | Positive | 1074709 - 1074921 | 8164.24 |
| acid phosphatase | DW204_04215 | Not Available | Negative | 1074918 - 1075862 | 36019.1 |
| hypothetical protein | DW204_04220 | Not Available | Negative | 1076052 - 1077479 | 50867.7 |
| tonb-dependent receptor | DW204_04225 | Not Available | Negative | 1077528 - 1080182 | 100078.0 |
| histidine-type phosphatase | DW204_04230 | Not Available | Negative | 1080347 - 1081633 | 49327.9 |
| transcription-repair coupling factor | DW204_04235 | Not Available | Negative | 1081767 - 1085135 | 127856.0 |
| hypothetical protein | DW204_04240 | Not Available | Negative | 1085220 - 1085543 | 12278.6 |
| hypothetical protein | DW204_04245 | Not Available | Negative | 1085987 - 1086856 | 32731.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

