Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW204_04050 | Not Available | Positive | 1040209 - 1040535 | 12281.9 |
| udp-glucose 4-epimerase gale | DW204_04055 | Not Available | Negative | 1040588 - 1041622 | 37990.7 |
| electron transport complex subunit rsxa | DW204_04060 | Not Available | Negative | 1041797 - 1042399 | 21314.3 |
| electron transport complex subunit e | DW204_04065 | Not Available | Negative | 1042419 - 1043003 | 20755.7 |
| rnfabcdge type electron transport complex subunit g | DW204_04070 | Not Available | Negative | 1043016 - 1043672 | 22337.1 |
| rnfabcdge type electron transport complex subunit d | DW204_04075 | Not Available | Negative | 1043669 - 1044658 | 35420.6 |
| electron transport complex subunit rsxc | DW204_04080 | Not Available | Negative | 1044671 - 1046008 | 47366.3 |
| fe-s cluster domain-containing protein | DW204_04085 | Not Available | Negative | 1046042 - 1047007 | 33218.4 |
| rsec/mucc family positive regulator of sigma(e) | DW204_04090 | Not Available | Negative | 1047025 - 1047450 | 15530.3 |
| threonine ammonia-lyase | DW204_04095 | Not Available | Negative | 1047594 - 1048790 | 42745.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

