Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| asparagine--trna ligase | DW204_04000 | Not Available | Positive | 1019528 - 1020931 | 53411.0 |
| duf1593 domain-containing protein | DW204_04005 | Not Available | Negative | 1021149 - 1022474 | 49607.2 |
| glycosyhydrolase | DW204_04010 | Not Available | Negative | 1022538 - 1025075 | 97493.2 |
| hypothetical protein | DW204_04015 | Not Available | Negative | 1025291 - 1027549 | 83721.5 |
| duf1735 domain-containing protein | DW204_04020 | Not Available | Negative | 1027568 - 1028587 | 37874.4 |
| ragb/susd family nutrient uptake outer membrane protein | DW204_04025 | Not Available | Negative | 1028609 - 1030384 | 66156.8 |
| susc/raga family tonb-linked outer membrane protein | DW204_04030 | Not Available | Negative | 1030409 - 1033255 | 106920.0 |
| ragb/susd family nutrient uptake outer membrane protein | DW204_04035 | Not Available | Negative | 1033297 - 1035195 | 73166.0 |
| tonb-dependent receptor | DW204_04040 | Not Available | Negative | 1035209 - 1038301 | 115551.0 |
| chloride channel protein | DW204_04045 | Not Available | Negative | 1038859 - 1040136 | 46097.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

