Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2807 domain-containing protein | DW204_03950 | Not Available | Positive | 1004651 - 1005553 | 32108.8 |
| hypothetical protein | DW204_03955 | Not Available | Negative | 1005642 - 1005977 | 12198.4 |
| sodium:calcium antiporter | DW204_03960 | Not Available | Negative | 1006041 - 1007006 | 33630.9 |
| hypothetical protein | DW204_03965 | Not Available | Negative | 1007019 - 1008014 | 36848.9 |
| glycoside hydrolase | DW204_03970 | Not Available | Positive | 1008196 - 1010118 | 72575.8 |
| alpha-l-arabinofuranosidase | DW204_03975 | Not Available | Positive | 1010145 - 1012655 | 93719.2 |
| beta-galactosidase | DW204_03980 | Not Available | Positive | 1012754 - 1015096 | 88573.7 |
| nad(p)-dependent oxidoreductase | DW204_03985 | Not Available | Positive | 1015289 - 1016602 | 47266.4 |
| adenylosuccinate lyase | DW204_03990 | Not Available | Positive | 1016725 - 1018071 | 50866.9 |
| rrna pseudouridine synthase | DW204_03995 | Not Available | Positive | 1018137 - 1019444 | 49841.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

