Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4832 domain-containing protein | DW204_03900 | Not Available | Positive | 985697 - 987292 | 60171.3 |
| fad-dependent oxidoreductase | DW204_03905 | Not Available | Positive | 987372 - 989255 | 70534.5 |
| alpha-galactosidase | DW204_03910 | Not Available | Positive | 989299 - 991380 | 79465.0 |
| acetylxylan esterase | DW204_03915 | Not Available | Positive | 991385 - 992683 | 48785.1 |
| glycoside hydrolase family 2 | DW204_03920 | Not Available | Positive | 992685 - 994475 | 69420.1 |
| duf4886 domain-containing protein | DW204_03925 | Not Available | Positive | 994472 - 997480 | 111816.0 |
| glycoside hydrolase family 2 protein | DW204_03930 | Not Available | Positive | 997490 - 999925 | 91996.5 |
| sam-dependent methyltransferase | DW204_03935 | Not Available | Positive | 1000169 - 1001368 | 44768.0 |
| abc transporter atp-binding protein | DW204_03940 | Not Available | Positive | 1001555 - 1002232 | 25054.3 |
| abc transporter permease | DW204_03945 | Not Available | Positive | 1002245 - 1004611 | 89078.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

