Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mannonate dehydratase | DW204_03795 | Not Available | Positive | 957062 - 958240 | 45114.1 |
| duf4981 domain-containing protein | DW204_03805 | Not Available | Negative | 959662 - 962775 | 118622.0 |
| lytic transglycosylase domain-containing protein | DW204_03810 | Not Available | Negative | 962815 - 963579 | 29194.7 |
| hypothetical protein | DW204_03815 | Not Available | Negative | 964082 - 964549 | 17417.5 |
| duf2007 domain-containing protein | DW204_03820 | Not Available | Negative | 964546 - 964773 | 8207.86 |
| glutamate-5-semialdehyde dehydrogenase | DW204_03825 | Not Available | Positive | 964972 - 966222 | 45469.4 |
| acetylornithine carbamoyltransferase | DW204_03830 | Not Available | Positive | 966295 - 967257 | 36414.6 |
| rhodanese-like domain-containing protein | DW204_03835 | Not Available | Negative | 967341 - 967739 | 14903.8 |
| hypothetical protein | DW204_03840 | Not Available | Negative | 967750 - 968415 | 24812.5 |
| acyltransferase | DW204_03845 | Not Available | Negative | 968412 - 969566 | 44222.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

