Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleoside kinase | DW204_03745 | Not Available | Negative | 944981 - 946645 | 64078.6 |
| na/pi cotransporter family protein | DW204_03750 | Not Available | Positive | 946736 - 948430 | 63243.3 |
| alpha-1,3-galactosidase b | DW204_03755 | Not Available | Negative | 948543 - 950321 | 67095.3 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | DW204_03760 | Not Available | Negative | 950497 - 951351 | 31041.3 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | DW204_03765 | Not Available | Negative | 951364 - 951948 | 21425.6 |
| nad-dependent deacylase | DW204_03770 | Not Available | Positive | 952096 - 952803 | 26295.6 |
| rubredoxin | DW204_03775 | Not Available | Positive | 952880 - 953044 | 5952.92 |
| hypothetical protein | DW204_03780 | Not Available | Negative | 953116 - 954912 | 69001.0 |
| laci family dna-binding transcriptional regulator | DW204_03785 | Not Available | Positive | 955125 - 956210 | 41189.3 |
| sdr family oxidoreductase | DW204_03790 | Not Available | Positive | 956216 - 957031 | 28990.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

