Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW204_03695 | Not Available | Positive | 937382 - 937603 | 7947.67 |
| hypothetical protein | DW204_03700 | Not Available | Positive | 937762 - 938616 | 32793.6 |
| hypothetical protein | DW204_03705 | Not Available | Positive | 938646 - 939017 | 13906.6 |
| hypothetical protein | DW204_03710 | Not Available | Positive | 939025 - 939582 | 19506.9 |
| molecular chaperone grpe | DW204_03715 | Not Available | Positive | 939594 - 939779 | 6460.08 |
| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase | DW204_03720 | Not Available | Negative | 939946 - 941787 | 68402.0 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | DW204_03725 | Not Available | Negative | 941792 - 942301 | 17675.0 |
| glycine cleavage system protein gcvh | DW204_03730 | Not Available | Negative | 942320 - 942700 | 14157.5 |
| hypothetical protein | DW204_03735 | Not Available | Negative | 942735 - 943331 | 22599.0 |
| rna polymerase sigma-54 factor | DW204_03740 | Not Available | Negative | 943425 - 944906 | 56335.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

