Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW204_03435 | Not Available | Positive | 883831 - 886155 | 86519.1 |
| dead/deah box helicase | DW204_03445 | Not Available | Negative | 886678 - 890598 | 149307.0 |
| restriction endonuclease subunit m | DW204_03450 | Not Available | Negative | 890595 - 891629 | 39756.2 |
| site-specific integrase | DW204_03455 | Not Available | Negative | 891885 - 893087 | 46297.2 |
| hypothetical protein | DW204_03460 | Not Available | Negative | 893092 - 893865 | 29673.2 |
| mobilization protein | DW204_03465 | Not Available | Negative | 893915 - 894841 | 35382.6 |
| plasmid mobilization relaxosome protein mobc | DW204_03470 | Not Available | Negative | 894838 - 895263 | 16345.7 |
| duf3408 domain-containing protein | DW204_03475 | Not Available | Negative | 895441 - 895905 | 17797.1 |
| dna-binding protein | DW204_03480 | Not Available | Positive | 896355 - 896666 | 12210.6 |
| dna-binding protein | DW204_03485 | Not Available | Positive | 896707 - 897012 | 11994.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

