Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | DW204_03265 | Not Available | Negative | 846569 - 847705 | 42586.1 |
| hypothetical protein | DW204_03270 | Not Available | Negative | 847711 - 848802 | 39912.1 |
| tonb-dependent receptor | DW204_03275 | Not Available | Negative | 848818 - 850791 | 74442.6 |
| potassium/proton antiporter | DW204_03280 | Not Available | Positive | 851508 - 852968 | 53686.3 |
| rna degradosome polyphosphate kinase | DW204_03285 | Not Available | Negative | 852965 - 855022 | 80537.5 |
| metallophosphoesterase | DW204_03290 | Not Available | Positive | 855086 - 855577 | 18831.6 |
| dtdp-glucose 4,6-dehydratase | DW204_03295 | Not Available | Positive | 855641 - 856780 | 43679.8 |
| aspartate--ammonia ligase | DW204_03300 | Not Available | Positive | 856988 - 858028 | 39736.2 |
| uracil-dna glycosylase | DW204_03305 | Not Available | Negative | 858128 - 858790 | 24933.7 |
| methionine synthase | DW204_03310 | Not Available | Negative | 858809 - 861571 | 101556.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

