Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter periplasmic adaptor subunit | DW204_03165 | Not Available | Positive | 817520 - 818716 | 44782.0 |
| multidrug efflux rnd transporter permease subunit | DW204_03170 | Not Available | Positive | 818740 - 821844 | 112989.0 |
| tolc family protein | DW204_03175 | Not Available | Positive | 821863 - 823245 | 51468.2 |
| gnat family n-acetyltransferase | DW204_03180 | Not Available | Negative | 823310 - 823846 | 20772.6 |
| peptidase m64 | DW204_03185 | Not Available | Negative | 823868 - 825154 | 48566.5 |
| tonb-dependent receptor | DW204_03190 | Not Available | Negative | 825423 - 827729 | 86007.6 |
| hypothetical protein | DW204_03195 | Not Available | Positive | 827755 - 828033 | 10597.6 |
| bifunctional metallophosphatase/5'-nucleotidase | DW204_03200 | Not Available | Negative | 828142 - 829896 | 66189.3 |
| rna-binding transcriptional accessory protein | DW204_03205 | Not Available | Positive | 830056 - 832194 | 80201.5 |
| nad(+) diphosphatase | DW204_03210 | Not Available | Positive | 832209 - 833006 | 29894.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

