Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyridine nucleotide-disulfide oxidoreductase | DW204_03000 | Not Available | Negative | 781632 - 784079 | 89285.1 |
| n-acetyltransferase | DW204_03005 | Not Available | Negative | 784211 - 784705 | 18976.7 |
| Trna-ala | Not Available | Not Available | Positive | 784824 - 784897 | Not Available |
| dna-binding response regulator | DW204_03015 | Not Available | Positive | 784978 - 785673 | 26526.2 |
| hamp domain-containing protein | DW204_03020 | Not Available | Positive | 785670 - 787040 | 52519.6 |
| hypothetical protein | DW204_03030 | Not Available | Positive | 789544 - 790584 | 39166.3 |
| beta-n-acetylhexosaminidase | DW204_03035 | Not Available | Negative | 790591 - 792657 | 77935.5 |
| duf1016 family protein | DW204_03050 | Not Available | Positive | 794327 - 795613 | 48663.2 |
| mobilization protein | DW204_03055 | Not Available | Positive | 795978 - 796937 | 36891.9 |
| hypothetical protein | DW204_03060 | Not Available | Positive | 797144 - 798355 | 45928.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

