Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| terb family tellurite resistance protein | DW204_02850 | Not Available | Positive | 743042 - 743521 | 18629.2 |
| duf368 domain-containing protein | DW204_02855 | Not Available | Negative | 743596 - 744510 | 33431.9 |
| thiol peroxidase | DW204_02860 | Not Available | Positive | 744639 - 745142 | 17810.7 |
| mannose-1-phosphate guanylyltransferase | DW204_02865 | Not Available | Negative | 745231 - 746295 | 40295.4 |
| bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | DW204_02870 | Not Available | Positive | 746378 - 747211 | 29319.8 |
| [acyl-carrier-protein] s-malonyltransferase | DW204_02875 | Not Available | Positive | 747272 - 748159 | 31422.0 |
| alpha-amylase | DW204_02880 | Not Available | Positive | 748273 - 749973 | 65183.7 |
| long-chain fatty acid--coa ligase | DW204_02885 | Not Available | Positive | 750100 - 751758 | 62764.2 |
| hypothetical protein | DW204_02890 | Not Available | Positive | 751770 - 753017 | 44052.9 |
| crp/fnr family transcriptional regulator | DW204_02895 | Not Available | Negative | 753053 - 753643 | 22729.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

