Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| linear amide c-n hydrolase | DW204_02750 | Not Available | Negative | 717893 - 718960 | 39285.8 |
| dna metabolism protein | DW204_02755 | Not Available | Positive | 719094 - 719861 | 30617.8 |
| trna pseudouridine(38-40) synthase trua | DW204_02760 | Not Available | Negative | 719858 - 720616 | 29198.7 |
| hypothetical protein | DW204_02765 | Not Available | Negative | 720628 - 721296 | 25080.5 |
| yeih family protein | DW204_02770 | Not Available | Positive | 721490 - 722566 | 38129.0 |
| arac family transcriptional regulator | DW204_02775 | Not Available | Negative | 722628 - 723476 | 32980.4 |
| duf308 domain-containing protein | DW204_02780 | Not Available | Negative | 723473 - 724042 | 20559.4 |
| cytochrome c biogenesis protein | DW204_02785 | Not Available | Negative | 724132 - 726225 | 80897.5 |
| hypothetical protein | DW204_02790 | Not Available | Negative | 726231 - 727388 | 43942.4 |
| hypothetical protein | DW204_02795 | Not Available | Negative | 727408 - 728133 | 26141.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

