Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fad:protein fmn transferase | DW204_02700 | Not Available | Positive | 705061 - 706074 | 37863.3 |
| eama family transporter | DW204_02705 | Not Available | Negative | 706329 - 707234 | 34163.1 |
| pas domain-containing protein | DW204_02710 | Not Available | Negative | 707337 - 708683 | 50877.3 |
| sigma-54-dependent fis family transcriptional regulator | DW204_02715 | Not Available | Negative | 708696 - 710054 | 50396.9 |
| tolc family protein | DW204_02720 | Not Available | Negative | 710095 - 711582 | 57184.1 |
| abc transporter atp-binding protein | DW204_02725 | Not Available | Negative | 711652 - 712317 | 24592.1 |
| abc transporter permease | DW204_02730 | Not Available | Negative | 712382 - 713677 | 49340.0 |
| abc transporter permease | DW204_02735 | Not Available | Negative | 713699 - 715012 | 49649.4 |
| hlyd family efflux transporter periplasmic adaptor subunit | DW204_02740 | Not Available | Negative | 715103 - 716353 | 47207.8 |
| putative dna modification/repair radical sam protein | DW204_02745 | Not Available | Positive | 716568 - 717857 | 49212.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

