Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf721 domain-containing protein | DW204_02600 | Not Available | Negative | 692297 - 692587 | 11184.8 |
| dna replication and repair protein recf | DW204_02605 | Not Available | Negative | 692574 - 693695 | 43452.2 |
| tetratricopeptide repeat protein | DW204_02610 | Not Available | Positive | 693844 - 694521 | 24216.8 |
| 6,7-dimethyl-8-ribityllumazine synthase | DW204_02615 | Not Available | Positive | 694627 - 695121 | 17653.0 |
| Trna-tyr | Not Available | Not Available | Positive | 695172 - 695257 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 695264 - 695336 | Not Available |
| Trna-tyr | Not Available | Not Available | Positive | 695354 - 695439 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 695447 - 695519 | Not Available |
| glycine cleavage system aminomethyltransferase gcvt | DW204_02640 | Not Available | Negative | 695570 - 696655 | 39937.0 |
| peptidase t | DW204_02645 | Not Available | Negative | 696729 - 697958 | 45196.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

