Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW204_02450 | Not Available | Negative | 651513 - 652355 | 31259.5 |
| hypothetical protein | DW204_02455 | Not Available | Negative | 652360 - 653049 | 25111.8 |
| duf4493 domain-containing protein | DW204_02460 | Not Available | Negative | 653086 - 655326 | 82256.8 |
| duf4493 domain-containing protein | DW204_02465 | Not Available | Negative | 655319 - 656542 | 44056.0 |
| duf4493 domain-containing protein | DW204_02470 | Not Available | Negative | 656535 - 659063 | 93070.2 |
| tonb-dependent receptor | DW204_02475 | Not Available | Positive | 659383 - 661842 | 92046.0 |
| helix-turn-helix domain-containing protein | DW204_02480 | Not Available | Positive | 661883 - 662728 | 32181.2 |
| helix-turn-helix domain-containing protein | DW204_02485 | Not Available | Positive | 662824 - 665724 | 110652.0 |
| duf5110 domain-containing protein | DW204_02490 | Not Available | Positive | 665853 - 668327 | 94978.8 |
| phosphoenolpyruvate synthase | DW204_02495 | Not Available | Negative | 668399 - 671365 | 113516.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

