Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-acp--udp-n-acetylglucosamine o-acyltransferase | DW204_02400 | Not Available | Negative | 637544 - 638311 | 27624.2 |
| tolc family protein | DW204_02405 | Not Available | Negative | 638334 - 639716 | 50229.5 |
| acrb/acrd/acrf family protein | DW204_02410 | Not Available | Negative | 639725 - 642958 | 117542.0 |
| efflux rnd transporter periplasmic adaptor subunit | DW204_02415 | Not Available | Negative | 643040 - 644251 | 43392.9 |
| nadp-dependent malic enzyme | DW204_02420 | Not Available | Positive | 644590 - 646875 | 84273.4 |
| hypothetical protein | DW204_02425 | Not Available | Positive | 646973 - 647152 | 6506.48 |
| nadp-specific glutamate dehydrogenase | DW204_02430 | Not Available | Positive | 647321 - 648655 | 49170.9 |
| hypothetical protein | DW204_02435 | Not Available | Negative | 648705 - 649154 | 17018.1 |
| hypothetical protein | DW204_02440 | Not Available | Negative | 649216 - 649782 | 21708.4 |
| hypothetical protein | DW204_02445 | Not Available | Negative | 649888 - 651510 | 59956.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

