Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| had family hydrolase | DW204_02345 | Not Available | Positive | 623997 - 624737 | 27501.0 |
| glucosamine-6-phosphate deaminase | DW204_02355 | Not Available | Positive | 626193 - 626984 | 29012.7 |
| glucosamine-6-phosphate deaminase | DW204_02360 | Not Available | Positive | 626996 - 628981 | 74802.1 |
| transglutaminase domain-containing protein | DW204_02365 | Not Available | Positive | 629098 - 631734 | 98150.6 |
| copper homeostasis protein cutc | DW204_02370 | Not Available | Negative | 631718 - 632467 | 27068.8 |
| Trna-arg | Not Available | Not Available | Positive | 632728 - 632799 | Not Available |
| mboat family protein | DW204_02380 | Not Available | Negative | 632963 - 634465 | 58545.2 |
| hypothetical protein | DW204_02385 | Not Available | Negative | 634431 - 635399 | 36342.4 |
| hypothetical protein | DW204_02390 | Not Available | Negative | 635386 - 636762 | 51403.8 |
| tetr/acrr family transcriptional regulator | DW204_02395 | Not Available | Negative | 636891 - 637535 | 25348.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

