Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sodium-translocating pyrophosphatase | DW204_02295 | Not Available | Positive | 611012 - 613216 | 76987.8 |
| amino acid-binding protein | DW204_02300 | Not Available | Negative | 613273 - 613689 | 15269.6 |
| phenylacetate--coa ligase family protein | DW204_02305 | Not Available | Negative | 613707 - 615008 | 48911.1 |
| pyridoxal phosphate-dependent aminotransferase | DW204_02310 | Not Available | Negative | 615051 - 616367 | 48640.6 |
| indolepyruvate oxidoreductase subunit beta | DW204_02315 | Not Available | Negative | 616374 - 616961 | 21277.9 |
| indolepyruvate ferredoxin oxidoreductase | DW204_02320 | Not Available | Negative | 616958 - 618571 | 58139.9 |
| amidohydrolase | DW204_02325 | Not Available | Negative | 618584 - 619348 | 28661.7 |
| lysine--trna ligase | DW204_02330 | Not Available | Positive | 619712 - 621439 | 66226.1 |
| nad(p)h-dependent glycerol-3-phosphate dehydrogenase | DW204_02335 | Not Available | Positive | 621512 - 622507 | 37217.3 |
| glucose-6-phosphate isomerase | DW204_02340 | Not Available | Positive | 622523 - 623872 | 49967.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

