Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lactate utilization protein | DW204_02245 | Not Available | Negative | 598422 - 599789 | 51336.9 |
| (fe-s)-binding protein | DW204_02250 | Not Available | Negative | 599786 - 600526 | 27308.0 |
| dna-binding response regulator | DW204_02255 | Not Available | Negative | 600818 - 601426 | 22735.6 |
| hemerythrin domain-containing protein | DW204_02260 | Not Available | Negative | 601423 - 602103 | 26227.5 |
| hypothetical protein | DW204_02265 | Not Available | Positive | 602355 - 602693 | 13203.7 |
| ygiq family radical sam protein | DW204_02270 | Not Available | Positive | 602703 - 604550 | 70521.0 |
| dmt family transporter | DW204_02275 | Not Available | Negative | 604576 - 605493 | 33374.1 |
| citrate/2-methylcitrate synthase | DW204_02280 | Not Available | Negative | 605624 - 606964 | 50760.3 |
| nadp-dependent isocitrate dehydrogenase | DW204_02285 | Not Available | Negative | 607018 - 608280 | 46245.9 |
| aconitate hydratase | DW204_02290 | Not Available | Negative | 608286 - 610541 | 82018.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

