Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-glycanase | DW204_02195 | Not Available | Negative | 588801 - 590039 | 46382.6 |
| hypothetical protein | DW204_02200 | Not Available | Negative | 590052 - 592100 | 79430.3 |
| alpha-l-fucosidase | DW204_02205 | Not Available | Negative | 592116 - 593465 | 51579.5 |
| Trna-ser | Not Available | Not Available | Positive | 593688 - 593774 | Not Available |
| Trna-glu | Not Available | Not Available | Positive | 593787 - 593859 | Not Available |
| Trna-ser | Not Available | Not Available | Positive | 593881 - 593967 | Not Available |
| formate c-acetyltransferase | DW204_02225 | Not Available | Positive | 594224 - 596446 | 83327.5 |
| pyruvate formate lyase-activating protein | DW204_02230 | Not Available | Positive | 596535 - 597263 | 27875.6 |
| hypothetical protein | DW204_02235 | Not Available | Positive | 597514 - 597741 | 8674.59 |
| hypothetical protein | DW204_02240 | Not Available | Negative | 597827 - 598414 | 21494.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

