Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| excinuclease abc subunit uvra | DW204_02145 | Not Available | Positive | 573169 - 575940 | 103707.0 |
| phosphotransferase | DW204_02150 | Not Available | Positive | 575958 - 577388 | 54975.7 |
| nucleotidyltransferase family protein | DW204_02155 | Not Available | Positive | 577385 - 578122 | 28011.8 |
| lps-assembly protein lptd | DW204_02160 | Not Available | Negative | 578119 - 580860 | 104560.0 |
| hdig domain-containing protein | DW204_02165 | Not Available | Negative | 580950 - 581486 | 20423.8 |
| duf1343 domain-containing protein | DW204_02170 | Not Available | Positive | 581556 - 582725 | 44089.7 |
| signal recognition particle protein | DW204_02175 | Not Available | Negative | 582798 - 584123 | 49069.0 |
| mate family efflux transporter | DW204_02180 | Not Available | Negative | 584190 - 585512 | 48443.8 |
| hypothetical protein | DW204_02185 | Not Available | Positive | 585726 - 587054 | 48784.3 |
| pdz domain-containing protein | DW204_02190 | Not Available | Positive | 587214 - 588716 | 55879.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

