Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3667 domain-containing protein | DW204_02095 | Not Available | Positive | 562736 - 564187 | 56955.8 |
| tigr03905 family tscpd domain-containing protein | DW204_02100 | Not Available | Negative | 564278 - 564517 | 8555.45 |
| yebc/pmpr family dna-binding regulatory protein | DW204_02105 | Not Available | Negative | 564623 - 565360 | 27839.7 |
| hypothetical protein | DW204_02110 | Not Available | Negative | 565384 - 565626 | 9277.38 |
| phenylalanine--trna ligase subunit beta | DW204_02115 | Not Available | Negative | 565636 - 568098 | 90677.6 |
| replicative dna helicase | DW204_02120 | Not Available | Negative | 568200 - 569762 | 58135.9 |
| 4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinase | DW204_02125 | Not Available | Positive | 569865 - 570689 | 30871.0 |
| gntr family transcriptional regulator | DW204_02130 | Not Available | Negative | 570954 - 571328 | 14713.8 |
| hypothetical protein | DW204_02135 | Not Available | Negative | 571333 - 572052 | 27380.0 |
| abc transporter atp-binding protein | DW204_02140 | Not Available | Negative | 572049 - 572861 | 30668.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

