Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-asp | Not Available | Not Available | Positive | 553130 - 553206 | Not Available |
| imidazole glycerol phosphate synthase subunit hish | DW204_02050 | Not Available | Positive | 553465 - 554055 | 22107.7 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase | DW204_02055 | Not Available | Positive | 554078 - 554800 | 26214.7 |
| imidazole glycerol phosphate synthase subunit hisf | DW204_02060 | Not Available | Positive | 554823 - 555578 | 27363.6 |
| bifunctional phosphoribosyl-amp cyclohydrolase/phosphoribosyl-atp diphosphatase hisie | DW204_02065 | Not Available | Positive | 555614 - 556225 | 23525.2 |
| atp-binding cassette domain-containing protein | DW204_02070 | Not Available | Positive | 556235 - 556915 | 25643.0 |
| aspartate kinase | DW204_02075 | Not Available | Positive | 557031 - 558356 | 49454.2 |
| diaminopimelate decarboxylase | DW204_02080 | Not Available | Positive | 558464 - 559624 | 42884.5 |
| hypothetical protein | DW204_02085 | Not Available | Negative | 559640 - 561838 | 85039.7 |
| crp/fnr family transcriptional regulator | DW204_02090 | Not Available | Positive | 561951 - 562652 | 26679.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

