Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 8-amino-7-oxononanoate synthase | DW204_01995 | Not Available | Negative | 542503 - 543678 | 43751.0 |
| adenosylmethionine--8-amino-7-oxononanoate transaminase | DW204_02000 | Not Available | Negative | 543697 - 544986 | 47933.0 |
| biotin synthase biob | DW204_02005 | Not Available | Negative | 544976 - 545938 | 35443.7 |
| hypothetical protein | DW204_02010 | Not Available | Negative | 545988 - 546377 | 14225.2 |
| tlpa family protein disulfide reductase | DW204_02015 | Not Available | Negative | 546467 - 547675 | 46115.4 |
| m56 family peptidase | DW204_02020 | Not Available | Negative | 547793 - 549061 | 48229.5 |
| blai/meci/copy family transcriptional regulator | DW204_02025 | Not Available | Negative | 549074 - 549439 | 14226.0 |
| mobilization protein | DW204_02030 | Not Available | Positive | 549880 - 551220 | 51465.8 |
| hypothetical protein | DW204_02035 | Not Available | Positive | 551457 - 552458 | 38122.3 |
| hypothetical protein | DW204_02040 | Not Available | Positive | 552433 - 553008 | 22241.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

