Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-oxoglutarate ferredoxin oxidoreductase subunit gamma | DW204_01945 | Not Available | Positive | 531535 - 532077 | 19939.7 |
| hypothetical protein | DW204_01950 | Not Available | Positive | 532249 - 534336 | 79956.0 |
| glutamine abc transporter substrate-binding protein | DW204_01955 | Not Available | Positive | 534347 - 535165 | 31202.4 |
| gfo/idh/moca family oxidoreductase | DW204_01960 | Not Available | Positive | 535178 - 536167 | 36857.2 |
| duf4421 domain-containing protein | DW204_01965 | Not Available | Positive | 536324 - 537343 | 39357.5 |
| hypothetical protein | DW204_01970 | Not Available | Negative | 537411 - 539024 | 60157.0 |
| hypothetical protein | DW204_01975 | Not Available | Negative | 539052 - 540287 | 46758.4 |
| atp-dependent dethiobiotin synthetase biod | DW204_01980 | Not Available | Negative | 540419 - 541066 | 24750.8 |
| malonyl-[acyl-carrier protein] o-methyltransferase bioc | DW204_01985 | Not Available | Negative | 541080 - 541829 | 28342.0 |
| duf452 family protein | DW204_01990 | Not Available | Negative | 541814 - 542482 | 25611.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

