Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-arabinose isomerase | DW204_01895 | Not Available | Positive | 519022 - 520548 | 57070.3 |
| atpase | DW204_01900 | Not Available | Positive | 520655 - 522250 | 57815.1 |
| transketolase | DW204_01905 | Not Available | Positive | 522385 - 524400 | 72658.5 |
| ribose 5-phosphate isomerase b | DW204_01910 | Not Available | Positive | 524400 - 524834 | 16074.2 |
| duf4468 domain-containing protein | DW204_01915 | Not Available | Positive | 525062 - 526105 | 39206.8 |
| bifunctional dihydroorotate dehydrogenase b nad binding subunit/nadph-dependent glutamate synthase | DW204_01920 | Not Available | Negative | 526270 - 528564 | 82528.4 |
| tetratricopeptide repeat protein | DW204_01925 | Not Available | Positive | 528917 - 529195 | 10534.3 |
| 4fe-4s dicluster domain-containing protein | DW204_01930 | Not Available | Positive | 529208 - 529438 | 8214.1 |
| 3-methyl-2-oxobutanoate dehydrogenase subunit vorb | DW204_01935 | Not Available | Positive | 529468 - 530550 | 39351.7 |
| 2-oxoglutarate oxidoreductase | DW204_01940 | Not Available | Positive | 530746 - 531519 | 28297.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

