Phocaeicola plebeius strain AM17-44

Gram-negativeRodNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Phocaeicola

Description

Phocaeicola plebeius strain AM17-44 is a Gram-negative, non-motile rod that resides in the intestinal microflora of various animal hosts, including Homo sapiens (humans), Gallus gallus (chickens), and Bos (cattle). As a chemoheterotroph, this strain relies on organic compounds for energy, thriving in anaerobic conditions. The strain is mesophilic, with an optimal growth temperature of 37°C, which aligns with the typical body temperature of its mammalian hosts. The presence of a single replicon indicates a streamlined genomic organization, potentially contributing to its adaptability within the gut environment. Notably, Phocaeicola plebeius strain AM17-44 is nonsporulating, meaning it does not form spores as a survival mechanism under adverse conditions. This trait may limit its resilience compared to sporulating bacteria, but it could also reflect its adaptation to a stable, nutrient-rich intestinal habitat. This bacterium’s role in the gut ecosystem is significant, as it participates in the complex interplay of microbial communities that contribute to host health. Its presence in the intestinal microflora suggests potential implications for digestion, nutrient absorption, and overall gut microbiome dynamics. Further studies could elucidate its specific functions and interactions within the gut, enhancing our understanding of microbial ecology in both humans and animals.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusPhocaeicola
SpeciesPhocaeicola plebeius
Strainstrain AM17-44

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranesNot Available
Image of Phocaeicola plebeius strain AM17-44
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatAnimal intestinal microflora
Biotic relationshipNot Available
Host(s)Homo sapiens, Gallus gallus, Bos
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Phocaeicola plebeius strain AM17-44 AM17-44.Scaf88, whole genome

Gene Summary

Adenine Count

993827 bp

Thymine Count

973116 bp

Guanine Count

754189 bp

Cytosine Count

808576 bp

Genome Length

3530609 bp

Protein-coding Genes

2788 genes

Non-Coding Genes

110 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinDW204_01740Not AvailablePositive473174 - 47365018763.6
yjbq family proteinDW204_01745Not AvailablePositive473744 - 47415715330.3
penicillin-binding proteinDW204_01750Not AvailableNegative474159 - 47608473764.4
hypothetical proteinDW204_01755Not AvailablePositive476464 - 47673610249.3
acyltransferaseDW204_01760Not AvailablePositive476743 - 47730021324.4
aminoglycoside phosphotransferase family proteinDW204_01765Not AvailableNegative477465 - 47854741602.0
tetratricopeptide repeat proteinDW204_01770Not AvailablePositive478756 - 47937623541.8
mfs transporterDW204_01775Not AvailablePositive479511 - 48105556943.2
ahpc/tsa family proteinDW204_01780Not AvailableNegative481149 - 48224940323.6
abgt transporterDW204_01785Not AvailableNegative482325 - 48300824956.6

Displaying genes 351 – 360 of 2898 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.