Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase | DW204_01615 | Not Available | Negative | 436412 - 438628 | 84589.6 |
| sialate o-acetylesterase | DW204_01620 | Not Available | Negative | 438625 - 440031 | 52354.0 |
| hypothetical protein | DW204_01630 | Not Available | Negative | 443268 - 443702 | 16494.8 |
| sensor histidine kinase | DW204_01635 | Not Available | Negative | 443810 - 445078 | 49029.3 |
| dna-binding response regulator | DW204_01640 | Not Available | Negative | 445075 - 445752 | 25810.1 |
| alpha-glucan family phosphorylase | DW204_01645 | Not Available | Negative | 445847 - 448414 | 98783.7 |
| glycosyl transferase | DW204_01650 | Not Available | Negative | 448435 - 450111 | 64211.3 |
| v-type atp synthase subunit k | DW204_01655 | Not Available | Negative | 450364 - 450825 | 15440.2 |
| v-type atp synthase subunit i | DW204_01660 | Not Available | Negative | 450861 - 452669 | 66642.2 |
| v-type atp synthase subunit d | DW204_01665 | Not Available | Negative | 452666 - 453271 | 23636.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

