Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l35 | DW204_01560 | Not Available | Negative | 423523 - 423720 | 7371.38 |
| translation initiation factor if-3 | DW204_01565 | Not Available | Negative | 423791 - 424372 | 22045.8 |
| threonine--trna ligase | DW204_01570 | Not Available | Negative | 424474 - 426414 | 74289.2 |
| tetratricopeptide repeat protein | DW204_01575 | Not Available | Negative | 426489 - 428492 | 77894.1 |
| peptide deformylase | DW204_01580 | Not Available | Negative | 428489 - 429043 | 20911.4 |
| holliday junction resolvase ruvx | DW204_01585 | Not Available | Negative | 429065 - 429481 | 15713.4 |
| glutamine-hydrolyzing gmp synthase | DW204_01590 | Not Available | Positive | 429668 - 431221 | 57799.5 |
| mate family efflux transporter | DW204_01595 | Not Available | Negative | 431282 - 432655 | 49998.2 |
| wg repeat-containing protein | DW204_01600 | Not Available | Negative | 432852 - 434204 | 49504.0 |
| hypothetical protein | DW204_01610 | Not Available | Negative | 434731 - 435903 | 44709.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

