Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | DW204_01510 | Not Available | Negative | 407470 - 409818 | 88514.0 |
| abc transporter permease | DW204_01515 | Not Available | Negative | 409909 - 412290 | 90370.0 |
| abc transporter permease | DW204_01520 | Not Available | Negative | 412312 - 414708 | 90943.1 |
| sel1 repeat family protein | DW204_01525 | Not Available | Negative | 414765 - 415718 | 35560.6 |
| efflux rnd transporter periplasmic adaptor subunit | DW204_01530 | Not Available | Negative | 415937 - 417187 | 47636.3 |
| tolc family protein | DW204_01535 | Not Available | Negative | 417200 - 418657 | 55912.4 |
| sigma-54-dependent fis family transcriptional regulator | DW204_01540 | Not Available | Positive | 418848 - 420218 | 51488.5 |
| ghkl domain-containing protein | DW204_01545 | Not Available | Positive | 420206 - 421489 | 48835.6 |
| lactonase family protein | DW204_01550 | Not Available | Negative | 421519 - 422673 | 41121.1 |
| 50s ribosomal protein l20 | DW204_01555 | Not Available | Negative | 423063 - 423413 | 13195.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

